Blocking Assay:Article Title: Discovery and Pharmacological Evaluation of STEAP4 as a Novel Target for HER2 Overexpressing Breast Cancer
Article Snippet: .. After blocking, the cells were incubated with the following primary antibodies overnight at 4°C: rabbit polyclonal anti-STEAP4 antibody (1:500 dilution; cat. no. 11944-1-AP, Proteintech, USA), mouse monoclonal anti-ErbB2 (1:100 dilution; cat. no. ab8054, Abcam, UK), rabbit monoclonal anti-EphA2 (1:200 dilution; cat. no. 6997S, Cell Signaling Technology, USA) and rabbit monoclonal anti-CD97 (1:200 dilution; cat. no. ab108368, Abcam, UK). .. Cells were then washed twice with ice-cold PBS, and incubated with the secondary antibody conjugated to Alexa Fluor 568 donkey anti-rabbit IgG (1:500 dilution; cat. no. ab175470, Abcam, UK) for 2 h in the dark at room temperature.
Incubation:Article Title: Discovery and Pharmacological Evaluation of STEAP4 as a Novel Target for HER2 Overexpressing Breast Cancer
Article Snippet: .. After blocking, the cells were incubated with the following primary antibodies overnight at 4°C: rabbit polyclonal anti-STEAP4 antibody (1:500 dilution; cat. no. 11944-1-AP, Proteintech, USA), mouse monoclonal anti-ErbB2 (1:100 dilution; cat. no. ab8054, Abcam, UK), rabbit monoclonal anti-EphA2 (1:200 dilution; cat. no. 6997S, Cell Signaling Technology, USA) and rabbit monoclonal anti-CD97 (1:200 dilution; cat. no. ab108368, Abcam, UK). .. Cells were then washed twice with ice-cold PBS, and incubated with the secondary antibody conjugated to Alexa Fluor 568 donkey anti-rabbit IgG (1:500 dilution; cat. no. ab175470, Abcam, UK) for 2 h in the dark at room temperature.
Binding Assay:Article Title: EphA2 phosphorylation at Ser897 by the Cdk1/MEK/ERK/RSK pathway regulates M-phase progression via maintenance of cortical rigidity.
Article Snippet: .. Rabbit monoclonal anti-EphA2 (IB, 1:1000; IF, 1:200; 6997S; Cell Signaling Technology, Danvers, MA, USA), anti-phospho-EphA2 Tyr588 (IB, 1:1000; 12677S; Cell Signaling Technology), anti-phosphoEphA2 Ser897 (IB, 1:1000; 6347S; Cell Signaling Technology), anti-phospho-p90RSK Ser380 (IB, 1:1000; 11989S; Cell Signaling Technology), anti-phospho-AuroraAThr288/AuroraBThr232/ Aurora C Thr198 (IB, 1:1000; 2914S; Cell Signaling Technology), anti-phospho-cAMP response element binding protein Ser133 (IB, 1:1000; 9198S; Cell Signaling Technology), anti-phospho-Akt Ser473 (IB, 1:1000, 4060S; Cell Signaling Technology), antiphospho-myosin light chain 2 Ser19 (IB, 1:500, 3671S; Cell Signaling Technology) antibodies, mouse monoclonal anti-RSK2 (IB, 1:1000; sc-9986; Santa Cruz Biotechnology, Dallas, TX, USA), anti-phospho-p44/42 MAPK Thr202/Tyr204 (pERK1/2) (IB, 1:1000; 9106S; Cell Signaling Technology), anti-V5 (IB, 1:1000; IF, 1:400; M215-3; Medical and Biological Laboratories, Nagoya, Japan), anti-HA (IB, 1:1000; IF, 1:1000; M180-3; Medical and Biological Laboratories), anti-IAK1 (Aurora A) (IB, 1:1000; 610938; BD Biosciences, San Jose, CA, USA), anti-AIM-1 (Aurora B) (IB, 1:1000; 611082; BD Biosciences), anti-Filamin 1 (IB, 1:2000; sc58764; Santa Cruz Biotechnology), anti-cAMP response element binding protein (IB, 1:1000; 9104S; Cell Signaling Technology), anti-Akt (pan) (IB, 1:1000; 2920S; Cell Signaling Technology), anti-RhoG (IB, 1:1000; IF, 1:200; sc-80015; Santa Cruz Biotechnology), anti-cdc2 (Cdk1) (IB, 1:1000; sc-54; Santa Cruz Biotechnology), anti-g-tubulin (IF, 1:400; GTU-88; MilliporeSigma), anti-FLAG (IB, 1:1000; IF, 1:200; M2, F1804; MilliporeSigma) antibodies, rabbit polyclonal anti-ERK2 (IB, 1:1000; sc-154; Santa Cruz Biotechnology), anti-cyclin B1 (IB, 1:1000; sc-752; Santa Cruz Biotechnology), anti-phospho-Filamin A Ser2152 (IB, 1:1000; 4761S; Cell Signaling Technology), anti-ARHGEF 16 (Ephexin4) (IB, 1:1000; A301-961A; Bethyl Laboratories, Montgomery, TX, USA) antibodies, rat monoclonal anti-a-tubulin (IB 1:2000; IF 1:800;MCA78G; Bio-Rad,Hercules, CA,USA) antibody, andgoat polyclonal anti-HSC70 (IB, 1:2000; sc-1059; Santa Cruz Biotechnology) antibody. .. For IB, horseradish peroxidase-conjugated anti-mouse (1:4000; 7076S; Cell Signaling Technology, or 1:8000; 115-035- 174; Jackson ImmunoResearch Laboratories, West Grove, PA, USA), anti-rabbit (1:4000; sc-2077; Santa Cruz Biotechnology, or 1:8000; 211-032-171; Jackson ImmunoResearch Laboratories), anti-rat (1:4000; sc-2964; Santa Cruz Biotechnology, or 1:8000; 712-035-153; Jackson ImmunoResearch Laboratories), and antigoat (1:4000; sc-2056; Santa Cruz Biotechnology) IgG antibodies were used.
Western Blot:Article Title: Kinase activity-independent role of EphA2 in the regulation of M-phase progression.
Article Snippet: Cell division is a tightly regulated, essential process for cell proliferation.. Very recently, we reported that EphA2 is phosphorylated at Ser897, via the Cdk1/MEK/ERK/RSK pathway, during M phase and contributes to proper M-phase progression by maintaining cortical rigidity via the EphA2pSer897/ephexin4/RhoG pathway.. Here, we show that EphA2 kinase activity is dispensable for M-phase progression.
Article Title: Lupeol and Paclitaxel cooperate in hindering hypoxia induced vasculogenic mimicry via suppression of HIF-1α-EphA2-Laminin-5γ2 network in human oral cancer.
Article Snippet: .. Rabbit polyclonal anti-HIF1α (Novus Biologicals, Cat# NB100-479, dilution: 1:500 for WB; 1:100 for IHC), Mouse monoclonal anti-VE-Cadherin (Novus Biologicals, Cat# NB600-1409, dilution: 1:100 for WB; 1:100 for IHC), Rabbit monoclonal anti-EphA2 (Cell signaling technology, Cat# 6997, Clone: D4A2, dilution: 1:1000 for WB; 1:100 for IHC), Rabbit monoclonal anti-pEphA2 (S-897, Cell signaling technology, Cat# 6347, Clone: D9A1, dilution: 1:1000 for WB; 1:100 for IHC),Rabbit monoclonal anti phospho p44/42 MAPK (Erk1/2) (Thr202/Tyr204), from Cell signaling technology, Cat# 4370, Clone: D13.14.4E, dilution: 1:2000 for WB; 1:100 for IHC), Rabbit polyclonal anti Erk1 + Erk2 (Abcam, Cat# ab17942, dilution: 1:1000 for WB), Mouse monoclonal anti-MMP2 (Novus Biologicals, Cat # NB200-114, Clone: 8B4, dilution: 1:1000 for WB; 1:100 for IHC), mouse monoclonal anti-Laminin-5 (Ƴ2 chain) from Merck ( Cat # MAB19562, Clone: D4B5, dilution: 1:1000 for WB; 1:100 for IHC), Rabbit monoclonal anti CD-31 or PECAM-1 (Santa Cruz Biotechnology, Cat# sc-1506-R, Clone: M-20, dilution: 1:100 for IHC), Rabbit monoclonal anti-E-Cadherin (Novus Biologicals, Cat# NBP2-67,540, Clone: ST54-01, dilution: 1:1000 for WB; 1:100 for IHC), Mouse monoclonal anti- Vimentin (Santa Cruz Biotechnology, Cat# sc-6260, Clone:V9, dilution: 1:200 for WB; 1:100 for IHC), Mouse monoclonal antiSnail (Novus Biologicals, Cat# NBP2-50,300, Clone: 20C8, dilution: 1:1000 for WB; 1:200 for IHC), Mouse monoclonal anti-Twist1 (Novus Biologicals, Cat# NBP2-37,364, Clone: 10E4E6, dilution: 1:1000 for WB; 1:200 for IHC), Rabbit polyclonal anti-CD133 (Novus Biologicals, Cat# NB120-16518, dilution: 1:1000 for WB; 1:100 for IHC), Rabbit monoclonal anti -Bcl2 (Novus Biologicals, Cat# NBP2-07,182, Clone: JF104-8, dilution: 1:1000 for WB), mouse monoclonal anti-Bax (Santa Cruz Biotechnology, Cat # sc-7480, Clone: B9, dilution: 1:200 for WB), Mouse monoclonal anti β-Actin (Santa Cruz Biotechnology, Cat# sc-47778, Clone: C4, dilution: 1:200 for WB) were used as primary antibodies in this study. .. Horseradish peroxidase (HRP) conjugated Goat Anti Rabbit polyclonal IgG (Sigma Aldrich, Cat# A0545) and Rabbit Anti Mouse IgG (Sigma Aldrich, Cat# A9044) were used as secondary antibodies.
Article Title: Targeting EphA2 under DNA damage causes mitotic bypass via p21 induction
Article Snippet: For Ca Ski cells, transfection was performed using PEI MAX (24765, Polysciences), and cells were selected with 2 μg/ml blasticidin S for 14 days. .. Primary antibodies used for immunoblotting (IB), immunofluorescence (IF) or flow cytometry were as follows: mouse monoclonal anti-Chk1 (IB, 1:1000; G-4, sc-8408, Santa Cruz Biotechnology), anti-γ-tubulin (IF, 1:250; GTU-88, T6557, Merck), anti-p21 (IB, 1:1000, DCS60, 2946, Cell Signaling Technology), anti-p53 (IB, 1:1000; DO-1, sc-126, Santa Cruz Biotechnology), and anti-phospho-histone H3 (IF, 1:400; 6G3, 9706, Cell Signaling Technology) antibodies; rabbit monoclonal anti-EphA2 (IB, 1:1000; 6997S, Cell Signaling Technology), anti-phospho-Chk1 (Ser345, IB, 1:1000; 133D3, #2348, Cell Signaling Technology), and anti-phospho-EphA2 (Ser897, IB, 1:1000; D9A1, 6347, Cell Signaling Technology) antibodies; rabbit polyclonal anti-cyclin B1 (IB, 1:3000; IF and flow cytometry, 1:250; H-433, sc-752, Santa Cruz Biotechnology), anti-phospho-histone H2A.X (γH2AX, IB, 1:500; 2577S, Cell Signaling Technology), and anti-phospho KAP1 (Ser824, IB, 1:1000; A300–767A, Bethyl Laboratories, Montgomery) antibodies; and rat monoclonal anti-α-tubulin (IB, 1:4000; IF, 1:800; MCA78 G, Bio-Rad) antibody. .. For immunoblotting analysis, horseradish peroxidase-conjugated donkey anti-mouse IgG (1:8000; 715–035–151), donkey anti-rabbit IgG (1:8000; 711–035–152), and donkey anti-rat IgG (1:8000–10000; 712–035–153) antibodies were purchased from Jackson ImmunoResearch Laboratories and used as secondary antibodies.
Immunofluorescence:Article Title: Kinase activity-independent role of EphA2 in the regulation of M-phase progression.
Article Snippet: Cell division is a tightly regulated, essential process for cell proliferation.. Very recently, we reported that EphA2 is phosphorylated at Ser897, via the Cdk1/MEK/ERK/RSK pathway, during M phase and contributes to proper M-phase progression by maintaining cortical rigidity via the EphA2pSer897/ephexin4/RhoG pathway.. Here, we show that EphA2 kinase activity is dispensable for M-phase progression.
Article Title: Targeting EphA2 under DNA damage causes mitotic bypass via p21 induction
Article Snippet: For Ca Ski cells, transfection was performed using PEI MAX (24765, Polysciences), and cells were selected with 2 μg/ml blasticidin S for 14 days. .. Primary antibodies used for immunoblotting (IB), immunofluorescence (IF) or flow cytometry were as follows: mouse monoclonal anti-Chk1 (IB, 1:1000; G-4, sc-8408, Santa Cruz Biotechnology), anti-γ-tubulin (IF, 1:250; GTU-88, T6557, Merck), anti-p21 (IB, 1:1000, DCS60, 2946, Cell Signaling Technology), anti-p53 (IB, 1:1000; DO-1, sc-126, Santa Cruz Biotechnology), and anti-phospho-histone H3 (IF, 1:400; 6G3, 9706, Cell Signaling Technology) antibodies; rabbit monoclonal anti-EphA2 (IB, 1:1000; 6997S, Cell Signaling Technology), anti-phospho-Chk1 (Ser345, IB, 1:1000; 133D3, #2348, Cell Signaling Technology), and anti-phospho-EphA2 (Ser897, IB, 1:1000; D9A1, 6347, Cell Signaling Technology) antibodies; rabbit polyclonal anti-cyclin B1 (IB, 1:3000; IF and flow cytometry, 1:250; H-433, sc-752, Santa Cruz Biotechnology), anti-phospho-histone H2A.X (γH2AX, IB, 1:500; 2577S, Cell Signaling Technology), and anti-phospho KAP1 (Ser824, IB, 1:1000; A300–767A, Bethyl Laboratories, Montgomery) antibodies; and rat monoclonal anti-α-tubulin (IB, 1:4000; IF, 1:800; MCA78 G, Bio-Rad) antibody. .. For immunoblotting analysis, horseradish peroxidase-conjugated donkey anti-mouse IgG (1:8000; 715–035–151), donkey anti-rabbit IgG (1:8000; 711–035–152), and donkey anti-rat IgG (1:8000–10000; 712–035–153) antibodies were purchased from Jackson ImmunoResearch Laboratories and used as secondary antibodies.
Immunohistochemistry:Article Title: Lupeol and Paclitaxel cooperate in hindering hypoxia induced vasculogenic mimicry via suppression of HIF-1α-EphA2-Laminin-5γ2 network in human oral cancer.
Article Snippet: .. Rabbit polyclonal anti-HIF1α (Novus Biologicals, Cat# NB100-479, dilution: 1:500 for WB; 1:100 for IHC), Mouse monoclonal anti-VE-Cadherin (Novus Biologicals, Cat# NB600-1409, dilution: 1:100 for WB; 1:100 for IHC), Rabbit monoclonal anti-EphA2 (Cell signaling technology, Cat# 6997, Clone: D4A2, dilution: 1:1000 for WB; 1:100 for IHC), Rabbit monoclonal anti-pEphA2 (S-897, Cell signaling technology, Cat# 6347, Clone: D9A1, dilution: 1:1000 for WB; 1:100 for IHC),Rabbit monoclonal anti phospho p44/42 MAPK (Erk1/2) (Thr202/Tyr204), from Cell signaling technology, Cat# 4370, Clone: D13.14.4E, dilution: 1:2000 for WB; 1:100 for IHC), Rabbit polyclonal anti Erk1 + Erk2 (Abcam, Cat# ab17942, dilution: 1:1000 for WB), Mouse monoclonal anti-MMP2 (Novus Biologicals, Cat # NB200-114, Clone: 8B4, dilution: 1:1000 for WB; 1:100 for IHC), mouse monoclonal anti-Laminin-5 (Ƴ2 chain) from Merck ( Cat # MAB19562, Clone: D4B5, dilution: 1:1000 for WB; 1:100 for IHC), Rabbit monoclonal anti CD-31 or PECAM-1 (Santa Cruz Biotechnology, Cat# sc-1506-R, Clone: M-20, dilution: 1:100 for IHC), Rabbit monoclonal anti-E-Cadherin (Novus Biologicals, Cat# NBP2-67,540, Clone: ST54-01, dilution: 1:1000 for WB; 1:100 for IHC), Mouse monoclonal anti- Vimentin (Santa Cruz Biotechnology, Cat# sc-6260, Clone:V9, dilution: 1:200 for WB; 1:100 for IHC), Mouse monoclonal antiSnail (Novus Biologicals, Cat# NBP2-50,300, Clone: 20C8, dilution: 1:1000 for WB; 1:200 for IHC), Mouse monoclonal anti-Twist1 (Novus Biologicals, Cat# NBP2-37,364, Clone: 10E4E6, dilution: 1:1000 for WB; 1:200 for IHC), Rabbit polyclonal anti-CD133 (Novus Biologicals, Cat# NB120-16518, dilution: 1:1000 for WB; 1:100 for IHC), Rabbit monoclonal anti -Bcl2 (Novus Biologicals, Cat# NBP2-07,182, Clone: JF104-8, dilution: 1:1000 for WB), mouse monoclonal anti-Bax (Santa Cruz Biotechnology, Cat # sc-7480, Clone: B9, dilution: 1:200 for WB), Mouse monoclonal anti β-Actin (Santa Cruz Biotechnology, Cat# sc-47778, Clone: C4, dilution: 1:200 for WB) were used as primary antibodies in this study. .. Horseradish peroxidase (HRP) conjugated Goat Anti Rabbit polyclonal IgG (Sigma Aldrich, Cat# A0545) and Rabbit Anti Mouse IgG (Sigma Aldrich, Cat# A9044) were used as secondary antibodies.
Flow Cytometry:Article Title: Targeting EphA2 under DNA damage causes mitotic bypass via p21 induction
Article Snippet: For Ca Ski cells, transfection was performed using PEI MAX (24765, Polysciences), and cells were selected with 2 μg/ml blasticidin S for 14 days. .. Primary antibodies used for immunoblotting (IB), immunofluorescence (IF) or flow cytometry were as follows: mouse monoclonal anti-Chk1 (IB, 1:1000; G-4, sc-8408, Santa Cruz Biotechnology), anti-γ-tubulin (IF, 1:250; GTU-88, T6557, Merck), anti-p21 (IB, 1:1000, DCS60, 2946, Cell Signaling Technology), anti-p53 (IB, 1:1000; DO-1, sc-126, Santa Cruz Biotechnology), and anti-phospho-histone H3 (IF, 1:400; 6G3, 9706, Cell Signaling Technology) antibodies; rabbit monoclonal anti-EphA2 (IB, 1:1000; 6997S, Cell Signaling Technology), anti-phospho-Chk1 (Ser345, IB, 1:1000; 133D3, #2348, Cell Signaling Technology), and anti-phospho-EphA2 (Ser897, IB, 1:1000; D9A1, 6347, Cell Signaling Technology) antibodies; rabbit polyclonal anti-cyclin B1 (IB, 1:3000; IF and flow cytometry, 1:250; H-433, sc-752, Santa Cruz Biotechnology), anti-phospho-histone H2A.X (γH2AX, IB, 1:500; 2577S, Cell Signaling Technology), and anti-phospho KAP1 (Ser824, IB, 1:1000; A300–767A, Bethyl Laboratories, Montgomery) antibodies; and rat monoclonal anti-α-tubulin (IB, 1:4000; IF, 1:800; MCA78 G, Bio-Rad) antibody. .. For immunoblotting analysis, horseradish peroxidase-conjugated donkey anti-mouse IgG (1:8000; 715–035–151), donkey anti-rabbit IgG (1:8000; 711–035–152), and donkey anti-rat IgG (1:8000–10000; 712–035–153) antibodies were purchased from Jackson ImmunoResearch Laboratories and used as secondary antibodies.
other:Article Title: Helicobacter Pylori Targets the EPHA2 Receptor Tyrosine Kinase in Gastric Cells Modulating Key Cellular Functions.
Article Snippet: The antibodies used in this study included rabbit polyclonal anti-AKT (#9272; Cell Signaling Technologies Inc., Danvers, MA, USA), rabbit polyclonal anti-phospho-Ser473-AKT (#4060; Cell Signaling Technology), rabbit polyclonal anti-EPHA2 (clone C-20; sc-924; Santa Cruz Biotechnology Inc., Dallas, TX, USA), rabbit monoclonal anti-EPHA2 (clone D4A2; #6997; Cell Signaling Technology), rabbit mAb phosphoSer897-EPHA2 (Clone D9A1; #6347; Cell Signaling Technology), rabbit pAb phospho Tyr772-EPHA2 (#8244; Cell Signaling Technology), mouse monoclonal anti-GAPDH (clone 0411; sc-47724; Santa Cruz), mouse monoclonal anti-alpha 1 integrin (clone SR84; #559594, BD Biosciences, San Jose, CA, USA), mouse monoclonal anti-beta 1 integrin (clone JB1B; sc-59829, Santa Cruz Biotechnology), rabbit polyclonal anti-p44/42 MAPK (ERK1/2; clone 137F5; #4695; Cell Signaling Technology), rabbit monoclonal anti-phospho Thr202/Tyr204-p44/42 MAPK (ERK1/2; clone D13.14.4E; #4370; Cell Signaling Technology), Alexa Fluor 488 goat anti-rabbit IgG (#A11034; Thermo Fisher Scientific, Waltham, MA, USA), rabbit polyclonal IgG (ab27478, Abcam, Cambridge, UK), mouse monoclonal antibody PY99 (sc-7020; Santa Cruz Biotechnology), mouse monoclonal anti-SRC (clone L4A1; #2110; Cell Signaling Technology), rabbit polyclonal anti-phospho Tyr416-SRC Family (#2101; Cell Signaling Technology), and mouse monoclonal anti-α-Tubulin (clone B-5-1-2; #T5168; Sigma-Aldrich Co., St. Louis, MO, USA).
Article Title: Helicobacter Pylori Targets the EPHA2 Receptor Tyrosine Kinase in Gastric Cells Modulating Key Cellular Functions
Article Snippet: The antibodies used in this study included rabbit polyclonal anti-AKT (#9272; Cell Signaling Technologies Inc., Danvers, MA, USA), rabbit polyclonal anti-phospho-Ser473-AKT (#4060; Cell Signaling Technology), rabbit polyclonal anti-EPHA2 (clone C-20; sc-924; Santa Cruz Biotechnology Inc., Dallas, TX, USA), rabbit monoclonal anti-EPHA2 (clone D4A2; #6997; Cell Signaling Technology), rabbit mAb phosphoSer897-EPHA2 (Clone D9A1; #6347; Cell Signaling Technology), rabbit pAb phospho Tyr772-EPHA2 (#8244; Cell Signaling Technology), mouse monoclonal anti-GAPDH (clone 0411; sc-47724; Santa Cruz), mouse monoclonal anti-alpha 1 integrin (clone SR84; #559594, BD Biosciences, San Jose, CA, USA), mouse monoclonal anti-beta 1 integrin (clone JB1B; sc-59829, Santa Cruz Biotechnology), rabbit polyclonal anti-p44/42 MAPK (ERK1/2; clone 137F5; #4695; Cell Signaling Technology), rabbit monoclonal anti-phospho Thr202/Tyr204-p44/42 MAPK (ERK1/2; clone D13.14.4E; #4370; Cell Signaling Technology), Alexa Fluor 488 goat anti-rabbit IgG (#A11034; Thermo Fisher Scientific, Waltham, MA, USA), rabbit polyclonal IgG (ab27478, Abcam, Cambridge, UK), mouse monoclonal antibody PY99 (sc-7020; Santa Cruz Biotechnology), mouse monoclonal anti-SRC (clone L4A1; #2110; Cell Signaling Technology), rabbit polyclonal anti-phospho Tyr416-SRC Family (#2101; Cell Signaling Technology), and mouse monoclonal anti-α-Tubulin (clone B-5-1-2; #T5168; Sigma-Aldrich Co., St. Louis, MO, USA).
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